Quantitative Trait Loci Mapping for Rice Yield-Related Traits Using Chromosomal Segment Substitution Lines

doi:10.1016/j.rsci.2019.02.001

Abstract

Zihe Li, Riaz Aamir, Yingxin Zhang, Bakr Anis Galal, Aike Zhu, Liyong Cao, Shihua Cheng. Quantitative Trait Loci Mapping for Rice Yield-Related Traits Using Chromosomal Segment Substitution Lines[J]. Rice Science, 2019, 26(5): 261-264.

Figures/Tables 3

References 23

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Trait	2014						2015
	Fuyang			Lingshui			Fuyang			Lingshui
	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL
GL (mm)	7.27	8.72	7.39 ± 0.03	7.85	9.17	7.72 ± 0.03	7.31	8.73	7.31 ± 0.02	7.37	8.54	7.23 ± 0.02
GW (mm)	2.45	2.34	2.39 ± 0.01	2.52	2.43	2.52 ± 0.01	2.46	2.32	2.41 ± 0.01	2.48	2.31	2.41 ± 0.01
LWR	2.99	3.75	3.10 ± 0.01	3.12	3.8	3.09 ± 0.01	2.98	3.79	3.05 ± 0.01	2.99	3.71	3.03 ± 0.01
TGW (g)	20.24	23.59	19.68 ± 0.17	21.23	23.32	19.66 ± 0.16	20.82	26.38	20.73 ± 0.15	22.48	27.37	20.79 ± 0.17

Trait	2014						2015
	Fuyang			Lingshui			Fuyang			Lingshui
	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL	ZH9308	XQZB	CSSL
GL (mm)	7.27	8.72	7.39 ± 0.03	7.85	9.17	7.72 ± 0.03	7.31	8.73	7.31 ± 0.02	7.37	8.54	7.23 ± 0.02
GW (mm)	2.45	2.34	2.39 ± 0.01	2.52	2.43	2.52 ± 0.01	2.46	2.32	2.41 ± 0.01	2.48	2.31	2.41 ± 0.01
LWR	2.99	3.75	3.10 ± 0.01	3.12	3.8	3.09 ± 0.01	2.98	3.79	3.05 ± 0.01	2.99	3.71	3.03 ± 0.01
TGW (g)	20.24	23.59	19.68 ± 0.17	21.23	23.32	19.66 ± 0.16	20.82	26.38	20.73 ± 0.15	22.48	27.37	20.79 ± 0.17

Trait	QTL	Chr	Marker	2014				2015				Reference
				Fuyang		Lingshui		Fuyang		Lingshui
				P-value	A	P-value	A	P-value	A	P-value	A
GL (mm)	qGL1-2	1	RM3746-RM8004	0.0028	0.1468	0	0.0067	0.0225	0.0148	0.0021	0.0214	-
GW (mm)	qGW1-2	1	RM3746-RM8004	0	-0.0003	0.0013	-0.0444	0.03	-0.0016	0.0019	-0.0057	-
	qGW3-2	3	RM3392-RM1324	0	-0.0104	0	-0.1195	0.0158	-0.0101	0.0029	-0.0065	Xu et al, 2002
	qGW4-1	4	RM5979-RM5757	0.0021	-0.0023	0.0061	-0.0691	0.0072	-0.0072	0.007	-0.0052	-
	qGW5-4	5	RM6841	0.0063	-0.004	0.0002	-0.0364	0.0268	-0.0017	0.0021	-0.0065	-
LWR	qLWR1-2	1	RM3746-RM8004	0	0.1664	0.0002	0.1199	0.0038	0.1081	0.0003	0.1335	-
LWR	qLWR7-2	7	RM5436-RM1132	0	0.1438	0.003	0.0951	0.0026	0.1096	0.0002	0.093	-
TGW (g)	qTGW2-3	2	RM6424-RM208	0.0039	-1.62	0.0172	-1.57	0.005	-0.53	0.007	-1.51	Bai et al, 2011
	qTGW3-1	3	InD36-RM1324	0	-1	0.0006	-0.49	0.0259	-0.38	0.0001	-1.8	Yan et al, 2003
	qTGW3-2	3	RM3392-RM1324	0	-1.56	0	-2.15	0.0005	-0.84	0.022	-1.46	Marathi et al, 2012
	qTGW4-2	4	RM5979-RM5757	0	-1.56	0	-1.22	0.0009	-1.47	0.0275	-1.36	Zou et al, 2005
	qTGW4-3	4	InD71	0.0375	-0.81	0.0018	-1.07	0.0025	-0.77	0.0055	-1.41	Marathi et al, 2012
	qTGW5-2	5	InD79	0	1.66	0.0016	1	0.0028	1.48	0.0058	1.25	-
	qTGW5-3	5	InD79-RM6841	0.0001	-0.75	0	-1.35	0.2183	-0.12	0.0007	-1.98	-
	qTGW7-1	7	RM5436-RM5875	0	-1.39	0	-2.15	0.0005	-0.94	0.0008	-1.03	Amarawathi et al, 2008
	qTGW7-2	7	RM5436-RM1132	0	-1.29	0	-2.13	0.0008	-0.85	0.0087	-0.71	Yuan et al, 2009; Wang et al, 2015

Trait	QTL	Chr	Marker	2014				2015				Reference
				Fuyang		Lingshui		Fuyang		Lingshui
				P-value	A	P-value	A	P-value	A	P-value	A
GL (mm)	qGL1-2	1	RM3746-RM8004	0.0028	0.1468	0	0.0067	0.0225	0.0148	0.0021	0.0214	-
GW (mm)	qGW1-2	1	RM3746-RM8004	0	-0.0003	0.0013	-0.0444	0.03	-0.0016	0.0019	-0.0057	-
	qGW3-2	3	RM3392-RM1324	0	-0.0104	0	-0.1195	0.0158	-0.0101	0.0029	-0.0065	Xu et al, 2002
	qGW4-1	4	RM5979-RM5757	0.0021	-0.0023	0.0061	-0.0691	0.0072	-0.0072	0.007	-0.0052	-
	qGW5-4	5	RM6841	0.0063	-0.004	0.0002	-0.0364	0.0268	-0.0017	0.0021	-0.0065	-
LWR	qLWR1-2	1	RM3746-RM8004	0	0.1664	0.0002	0.1199	0.0038	0.1081	0.0003	0.1335	-
LWR	qLWR7-2	7	RM5436-RM1132	0	0.1438	0.003	0.0951	0.0026	0.1096	0.0002	0.093	-
TGW (g)	qTGW2-3	2	RM6424-RM208	0.0039	-1.62	0.0172	-1.57	0.005	-0.53	0.007	-1.51	Bai et al, 2011
	qTGW3-1	3	InD36-RM1324	0	-1	0.0006	-0.49	0.0259	-0.38	0.0001	-1.8	Yan et al, 2003
	qTGW3-2	3	RM3392-RM1324	0	-1.56	0	-2.15	0.0005	-0.84	0.022	-1.46	Marathi et al, 2012
	qTGW4-2	4	RM5979-RM5757	0	-1.56	0	-1.22	0.0009	-1.47	0.0275	-1.36	Zou et al, 2005
	qTGW4-3	4	InD71	0.0375	-0.81	0.0018	-1.07	0.0025	-0.77	0.0055	-1.41	Marathi et al, 2012
	qTGW5-2	5	InD79	0	1.66	0.0016	1	0.0028	1.48	0.0058	1.25	-
	qTGW5-3	5	InD79-RM6841	0.0001	-0.75	0	-1.35	0.2183	-0.12	0.0007	-1.98	-
	qTGW7-1	7	RM5436-RM5875	0	-1.39	0	-2.15	0.0005	-0.94	0.0008	-1.03	Amarawathi et al, 2008
	qTGW7-2	7	RM5436-RM1132	0	-1.29	0	-2.13	0.0008	-0.85	0.0087	-0.71	Yuan et al, 2009; Wang et al, 2015

Quantitative Trait Loci Mapping for Rice Yield-Related Traits Using Chromosomal Segment Substitution Lines

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