Rice Science ›› 2016, Vol. 23 ›› Issue (4): 165-183.DOI: 10.1016/j.rsci.2016.06.001
• • 下一篇
收稿日期:2015-06-17
接受日期:2015-10-19
出版日期:2016-07-28
发布日期:2016-04-11
. [J]. Rice Science, 2016, 23(4): 165-183.
Fig. 1. Herbicides applied for rice cultivation.Data are from Ravi and Mohankumar (2004).
Fig. 2. Induction, production, release and transport of allelochemicals and their effects.
| Source | Allelochemical | Reference |
|---|---|---|
| Root exudate | Momilactone A, 4-hydroxybenzaldehyde, 4-hydroxybenzoic acid, 3-hydroxybenzoic acid, p-coumaric acid, caffeic acid, 3-hydroxy-4-methoxybenzoic acid, valeric acid, tetradecanoic acid, stearic acid, 2-methyl-1,4-benzenediol, 1-ethyl-3,5-dimethylbenzene, 4-ethylbenzaldehyde, cinnamic aldehyde, octadecane, 3-epicosene, 1-eicosanol, 9,12-octadecadienoic acid, 7-hexadecenoic acid methyl ester, 12-octadecenoic acid methyl ester, 12-methyl-tridecanoic acid methyl ester, cis-1-butyl-2-methyl cyclo propane, dehydroabietic acid, cholest-5-en-3(β)-ol, 4-hydroxybenzoic acid, ferulic acid, abietic acid, resorcinol, 2-hydroxyphenylacetic acid, 4-hydroxyphenylacetic acid, 4-phenylbutyric acid, cinnamic acid, vanillic acid, syringic acid, salicylic acid, 5-hydroxyindole-3-acetic acid, indole-5-carboxylic acid, 5-(12-heptadecenyl)-resorcinol, 5,7-4′-trihydroxy 3′,5′-dimethoxyflavone, 3-isopropyl-5-acetoxycyclohexene-2-one-1 | Bouillant et al, 1994; Mattice et al, 1998; Kim and Kim, 2000; Kong et al, 2004b; Seal et al, 2004b |
| Seedling | Momilactone B | Kato-Noguchi and Ino, 2005 |
| Leaf | Momilactones A and B | Cartwright et al, 1977, 1981; Kodama et al, 1988; Lee et al, 1999 |
| Rice straw | Phenolic acids, phenolic aldehyde, aliphatic acids, flavone, cyclohexane, momilactones | Pramaink et al, 2000; Kong et al, 2004a |
| Rice hull | 1-tetratriacontanol and β-sitosterol-3-O-β-D-glucoside, momilactones A and B, dicyclohexanyl orizane, salicylic acid, o-hydroxyphenylacetic acid, syringic acid, ferrulic acide, benzoic acid, p-hydroxybenzoic acid, m-coumaric acid, o-coumaric acid, p-coumaric acid | Chung et al, 2002, 2005; Park et al, 2009 |
| Decomposing rice residue | Phenolic acids, 2-hydroxyphenylacetic acid, 4-hydroxybenzoic acid, vanillic acid, p-coumaric acid, ferulic acid, benzoic acid, protocatechuic acid, gallic acid, syringic acid, salicylic acid, gentisic acid, β-resorcylic acid, caffeic acid, sinapinic acid | Kuwatsuka and Shindo, 1973; Chou and Lin, 1976 |
Table 1 Production of various allelochemicals from rice (Oryza sativa).
| Source | Allelochemical | Reference |
|---|---|---|
| Root exudate | Momilactone A, 4-hydroxybenzaldehyde, 4-hydroxybenzoic acid, 3-hydroxybenzoic acid, p-coumaric acid, caffeic acid, 3-hydroxy-4-methoxybenzoic acid, valeric acid, tetradecanoic acid, stearic acid, 2-methyl-1,4-benzenediol, 1-ethyl-3,5-dimethylbenzene, 4-ethylbenzaldehyde, cinnamic aldehyde, octadecane, 3-epicosene, 1-eicosanol, 9,12-octadecadienoic acid, 7-hexadecenoic acid methyl ester, 12-octadecenoic acid methyl ester, 12-methyl-tridecanoic acid methyl ester, cis-1-butyl-2-methyl cyclo propane, dehydroabietic acid, cholest-5-en-3(β)-ol, 4-hydroxybenzoic acid, ferulic acid, abietic acid, resorcinol, 2-hydroxyphenylacetic acid, 4-hydroxyphenylacetic acid, 4-phenylbutyric acid, cinnamic acid, vanillic acid, syringic acid, salicylic acid, 5-hydroxyindole-3-acetic acid, indole-5-carboxylic acid, 5-(12-heptadecenyl)-resorcinol, 5,7-4′-trihydroxy 3′,5′-dimethoxyflavone, 3-isopropyl-5-acetoxycyclohexene-2-one-1 | Bouillant et al, 1994; Mattice et al, 1998; Kim and Kim, 2000; Kong et al, 2004b; Seal et al, 2004b |
| Seedling | Momilactone B | Kato-Noguchi and Ino, 2005 |
| Leaf | Momilactones A and B | Cartwright et al, 1977, 1981; Kodama et al, 1988; Lee et al, 1999 |
| Rice straw | Phenolic acids, phenolic aldehyde, aliphatic acids, flavone, cyclohexane, momilactones | Pramaink et al, 2000; Kong et al, 2004a |
| Rice hull | 1-tetratriacontanol and β-sitosterol-3-O-β-D-glucoside, momilactones A and B, dicyclohexanyl orizane, salicylic acid, o-hydroxyphenylacetic acid, syringic acid, ferrulic acide, benzoic acid, p-hydroxybenzoic acid, m-coumaric acid, o-coumaric acid, p-coumaric acid | Chung et al, 2002, 2005; Park et al, 2009 |
| Decomposing rice residue | Phenolic acids, 2-hydroxyphenylacetic acid, 4-hydroxybenzoic acid, vanillic acid, p-coumaric acid, ferulic acid, benzoic acid, protocatechuic acid, gallic acid, syringic acid, salicylic acid, gentisic acid, β-resorcylic acid, caffeic acid, sinapinic acid | Kuwatsuka and Shindo, 1973; Chou and Lin, 1976 |
| Allelochemical | Mode of action | Target | Reference |
|---|---|---|---|
| Momilactone B | Inhibits accumulation of subtilisin-like serine protease, amyrin synthase LUP2, β-glucosidase, malate synthase, breakdown of cruciferin 2; induces accumulation of translationally controlled tumor protein, glutathione S-transferase and 1-cysteine peroxiredoxin 1 | Arabidopsis thaliana | Kato-Noguchi and Kitajima, 2015 |
| Momilactones A and B, 1-tetratriacontanol | Inhibit chlorophyll content | Duckweed | Macias et al, 2005 |
| Crude extracts of allelopathic rice cultivars | Inhibit superoxide dismutase and catalase activities | Barnyard grass seedling | Lin et al, 2000 |
| Ferulic acid | Inhibits photosynthesis; reduces stomatal conductance | Several crops | Einhellig, 1996 |
| Ferulic, vanillic and p-coumaric acids | Inhibit phosphorus uptake | Cucumber | Lyu et al, 1990 |
| Salicylate | Inhibits K+ uptake to depolarize membranes and reduce ATP content of roots | - | Balke, 1985 |
| Pelargonic acid (nonanoic acid) | Interferes with membrane functions | - | Irzyk et al, 1997 |
| Tannins, phenolic acid and flavanoids | Inhibit nitrification | Soil | Rice and Pancholy, 1972 |
Table 2 Mode of action of major rice allelochemicals.
| Allelochemical | Mode of action | Target | Reference |
|---|---|---|---|
| Momilactone B | Inhibits accumulation of subtilisin-like serine protease, amyrin synthase LUP2, β-glucosidase, malate synthase, breakdown of cruciferin 2; induces accumulation of translationally controlled tumor protein, glutathione S-transferase and 1-cysteine peroxiredoxin 1 | Arabidopsis thaliana | Kato-Noguchi and Kitajima, 2015 |
| Momilactones A and B, 1-tetratriacontanol | Inhibit chlorophyll content | Duckweed | Macias et al, 2005 |
| Crude extracts of allelopathic rice cultivars | Inhibit superoxide dismutase and catalase activities | Barnyard grass seedling | Lin et al, 2000 |
| Ferulic acid | Inhibits photosynthesis; reduces stomatal conductance | Several crops | Einhellig, 1996 |
| Ferulic, vanillic and p-coumaric acids | Inhibit phosphorus uptake | Cucumber | Lyu et al, 1990 |
| Salicylate | Inhibits K+ uptake to depolarize membranes and reduce ATP content of roots | - | Balke, 1985 |
| Pelargonic acid (nonanoic acid) | Interferes with membrane functions | - | Irzyk et al, 1997 |
| Tannins, phenolic acid and flavanoids | Inhibit nitrification | Soil | Rice and Pancholy, 1972 |
| Gene/Clone | Length (bp) | Accession No. | Best homologue | Rice variety | Reference |
|---|---|---|---|---|---|
| DEG-1 | 561 | AJ296743.1 | S-adenosylmethionine synthetase | Sathi | Junaedi et al, 2008 |
| DEG-2 | 531 | AY522330.1 | Ribulose 1,5-bisphosphate carboxylase large subunit | ||
| DEG-3 | 491 | CT829547.1 | Oxygen evolving complex protein in photosystem II | ||
| DEG-4 | 528 | CT834850.1 | Unknown protein | ||
| DEG-5 | 290 | CT828153.1 | Histone 2B protein | ||
| DEG-6 | 511 | AK243448.1 | Nicotineamine aminotransferase | ||
| DEG-7 | 207 | AC122144.1 | Putative serine/threonine protein kinase | ||
| DEG-8 | 531 | NM_001056236.1 | Putative transposable element oxysterol-binding protein | ||
| OsCPS4 | NA | Os04g0990 | Copalyl diphosphate synthase 4 | Zhonghua 11 | Xu et al, 2012 |
| OsKSL4 | NA | Os0410060 | Kaurene synthase like 4 | Hwayoung | |
| Clone 312 (I) | 619 | ABR25842 | Putative triosephosphate isomerase | PI312777 (under low nitrogen treatment) | Song et al, 2008 |
| Clone 323 (I) | 386 | NM_001057746 | Putative glycine hydroxymethyl transferase | ||
| Clone 403 (I) | 705 | ABR25842 | Putative triosephosphate isomerase | ||
| Clone 891 (I) | 593 | NM_001048551 | Putative triosephosphate isomerase | ||
| Clone 278 (II) | 498 | ABR25322 | Phenylalanine ammonia-lyase | ||
| Clone 547 (II) | 441 | NM_001071389 | Putative o-methyltransferase | ||
| Clone 663 (II) | 542 | BAE45261 | Cytochrome P450 | ||
| Clone 34 (III) | 504 | AAM08829 | Putative SCARECROW gene regulator-like | ||
| Clone 84 (III) | 391 | NM_001051791 | No apical meristem (NAM) protein | ||
| Clone 257 (III) | 544 | ABA98006 | Subitilisin-chymotrypsin inhibitor | ||
| Clone 642 (III) | 572 | NM_001059257 | DNA binding protein S1FA family protein | ||
| Clone 935 (III) | 551 | NM_001060636 | S1/P1 nuclease | ||
| Clone 489 (III) | 552 | BAD81918 | BolA-like protein | ||
| Clone 272 (III) | 290 | NM_001065974 | Putative calcium-dependent lipid binding 1 protein | ||
| Clone 803 (IV) | 384 | NM_001070187 | Putative protein kinase interactor | ||
| Clone 943 (IV) | 623 | A55092 | Catalase 2 (CAT-2) | ||
| Clone 243 (IV) | 621 | NM_001052425 | Myosin-like protein | ||
| Clone 201 (IV) | 232 | AAB70546 | Metallothionein-like protein type 1 | ||
| Clone 120 (IV) | 230 | AAB70546 | Metallothionein-like protein type 1 | ||
| Clone 715 (IV) | 618 | NM_001075076 | Metallothionein-like protein type 1 | ||
| Clone 917 (IV) | 522 | NM_001057541 | Expressed protein | ||
| Clone 177 (V) | 466 | ABR25449 | Putative 40S ribosomal S13 | ||
| Clone 188 (V) | 415 | NM_001056613 | 60S ribosomal protein L22-2 | ||
| Clone 341 (V) | 459 | NM_001056613 | Putative 60S ribosomal protein L22-2 | ||
| Clone 486 (V) | 736 | ABA94602 | Putative 40S ribosomal protein S9 | ||
| Clone 399 (V) | 383 | A2WXX3 | Putative 60S ribosomal protein L5 | ||
| Clone 349 (V) | 507 | BAD36074 | Putative chaperonin 10 | ||
| Clone 640 (V) | 372 | NM_001056613 | 60S ribosomal protein | ||
| Clone 657 (V) | 410 | ABR25449 | Putative 40S ribosomal protein S13 | ||
| Clone 622 (V) | 634 | NM_001062753 | Putative apoptosis-related protein | ||
| Clone 743 (V) | 406 | NM_001056776 | HSP20-like chaperone | ||
| Clone 163 | 449 | CM000126 | Ubiquitin carrier protein | PI312777 (under salicylic acid treatment) | Fang et al, 2009 |
| Clone 171 | 388 | AC131374 | Putative receptor-like protein kinase | ||
| Clone 265 | 295 | AC092263 CM000126 | Putative glutathione S-transferase | ||
| Clone 316 | 323 | AAL34132 | Peptidyl-prolyl cis-trans isomerase | ||
| Clone 438 | 309 | AC13174 | Putative acetyltransferase | ||
| Clone 459 | 347 | ABR25322 | Putative receptor-like protein kinase | ||
| Clone 507 | 303 | AP003734 | Phenylalanine ammonia-lyase | ||
| Clone 512 | 319 | AY224431 | Putative cinnamoyl-CoA reductase | ||
| Clone 557 | 345 | AP005578 | Serine/threonine protein kinase-like protein | ||
| Clone 587 | 200 | AP003263 | Putative endosperm specific protein SC3 | ||
| Clone 593 | 256 | CM000126 | Putative peroxidase | ||
| Clone 617 | 242 | AF200528 | Ubiquitin carrier protein | ||
| Clone 670 | 286 | AP003252 | Cellulose synthase-4 | ||
| Clone 695 | 260 | BAG domain containing protein-like | |||
| Clone 163 | 449 | CM000126 AC131374 AC092263 CM000126 AAL34132 AC13174 ABR25322 AP003734 AY224431 AP005578 | Ubiquitin carrier protein | PI312777 (under salicylic acid treatment) | Fang et al, 2009 |
| Clone 171 | 388 | AP003263 | Putative receptor-like protein kinase | ||
| Clone 265 | 295 | CM000126 AF200528 AP003252 | Putative glutathione S-transferase | ||
| Clone 316 | 323 | Peptidyl-prolyl cis-trans isomerase | |||
| Clone 438 | 309 | Putative acetyltransferase | |||
| Clone 459 | 347 | Putative receptor-like protein kinase | |||
| Clone 507 | 303 | Phenylalanine ammonia-lyase | |||
| Clone 512 | 319 | Putative cinnamoyl-CoA reductase | |||
| Clone 557 | 345 | Serine/threonine protein kinase-like protein | |||
| Clone 587 | 200 | Putative endosperm specific protein SC3 | |||
| Clone 593 | 256 | Putative peroxidase | |||
| Clone 617 | 242 | Ubiquitin carrier protein | |||
| Clone 670 | 286 | Cellulose synthase-4 | |||
| Clone 695 | 260 | BAG domain containing protein-like |
Table 3 Genes and clones responsible for rice allelopathy.
| Gene/Clone | Length (bp) | Accession No. | Best homologue | Rice variety | Reference |
|---|---|---|---|---|---|
| DEG-1 | 561 | AJ296743.1 | S-adenosylmethionine synthetase | Sathi | Junaedi et al, 2008 |
| DEG-2 | 531 | AY522330.1 | Ribulose 1,5-bisphosphate carboxylase large subunit | ||
| DEG-3 | 491 | CT829547.1 | Oxygen evolving complex protein in photosystem II | ||
| DEG-4 | 528 | CT834850.1 | Unknown protein | ||
| DEG-5 | 290 | CT828153.1 | Histone 2B protein | ||
| DEG-6 | 511 | AK243448.1 | Nicotineamine aminotransferase | ||
| DEG-7 | 207 | AC122144.1 | Putative serine/threonine protein kinase | ||
| DEG-8 | 531 | NM_001056236.1 | Putative transposable element oxysterol-binding protein | ||
| OsCPS4 | NA | Os04g0990 | Copalyl diphosphate synthase 4 | Zhonghua 11 | Xu et al, 2012 |
| OsKSL4 | NA | Os0410060 | Kaurene synthase like 4 | Hwayoung | |
| Clone 312 (I) | 619 | ABR25842 | Putative triosephosphate isomerase | PI312777 (under low nitrogen treatment) | Song et al, 2008 |
| Clone 323 (I) | 386 | NM_001057746 | Putative glycine hydroxymethyl transferase | ||
| Clone 403 (I) | 705 | ABR25842 | Putative triosephosphate isomerase | ||
| Clone 891 (I) | 593 | NM_001048551 | Putative triosephosphate isomerase | ||
| Clone 278 (II) | 498 | ABR25322 | Phenylalanine ammonia-lyase | ||
| Clone 547 (II) | 441 | NM_001071389 | Putative o-methyltransferase | ||
| Clone 663 (II) | 542 | BAE45261 | Cytochrome P450 | ||
| Clone 34 (III) | 504 | AAM08829 | Putative SCARECROW gene regulator-like | ||
| Clone 84 (III) | 391 | NM_001051791 | No apical meristem (NAM) protein | ||
| Clone 257 (III) | 544 | ABA98006 | Subitilisin-chymotrypsin inhibitor | ||
| Clone 642 (III) | 572 | NM_001059257 | DNA binding protein S1FA family protein | ||
| Clone 935 (III) | 551 | NM_001060636 | S1/P1 nuclease | ||
| Clone 489 (III) | 552 | BAD81918 | BolA-like protein | ||
| Clone 272 (III) | 290 | NM_001065974 | Putative calcium-dependent lipid binding 1 protein | ||
| Clone 803 (IV) | 384 | NM_001070187 | Putative protein kinase interactor | ||
| Clone 943 (IV) | 623 | A55092 | Catalase 2 (CAT-2) | ||
| Clone 243 (IV) | 621 | NM_001052425 | Myosin-like protein | ||
| Clone 201 (IV) | 232 | AAB70546 | Metallothionein-like protein type 1 | ||
| Clone 120 (IV) | 230 | AAB70546 | Metallothionein-like protein type 1 | ||
| Clone 715 (IV) | 618 | NM_001075076 | Metallothionein-like protein type 1 | ||
| Clone 917 (IV) | 522 | NM_001057541 | Expressed protein | ||
| Clone 177 (V) | 466 | ABR25449 | Putative 40S ribosomal S13 | ||
| Clone 188 (V) | 415 | NM_001056613 | 60S ribosomal protein L22-2 | ||
| Clone 341 (V) | 459 | NM_001056613 | Putative 60S ribosomal protein L22-2 | ||
| Clone 486 (V) | 736 | ABA94602 | Putative 40S ribosomal protein S9 | ||
| Clone 399 (V) | 383 | A2WXX3 | Putative 60S ribosomal protein L5 | ||
| Clone 349 (V) | 507 | BAD36074 | Putative chaperonin 10 | ||
| Clone 640 (V) | 372 | NM_001056613 | 60S ribosomal protein | ||
| Clone 657 (V) | 410 | ABR25449 | Putative 40S ribosomal protein S13 | ||
| Clone 622 (V) | 634 | NM_001062753 | Putative apoptosis-related protein | ||
| Clone 743 (V) | 406 | NM_001056776 | HSP20-like chaperone | ||
| Clone 163 | 449 | CM000126 | Ubiquitin carrier protein | PI312777 (under salicylic acid treatment) | Fang et al, 2009 |
| Clone 171 | 388 | AC131374 | Putative receptor-like protein kinase | ||
| Clone 265 | 295 | AC092263 CM000126 | Putative glutathione S-transferase | ||
| Clone 316 | 323 | AAL34132 | Peptidyl-prolyl cis-trans isomerase | ||
| Clone 438 | 309 | AC13174 | Putative acetyltransferase | ||
| Clone 459 | 347 | ABR25322 | Putative receptor-like protein kinase | ||
| Clone 507 | 303 | AP003734 | Phenylalanine ammonia-lyase | ||
| Clone 512 | 319 | AY224431 | Putative cinnamoyl-CoA reductase | ||
| Clone 557 | 345 | AP005578 | Serine/threonine protein kinase-like protein | ||
| Clone 587 | 200 | AP003263 | Putative endosperm specific protein SC3 | ||
| Clone 593 | 256 | CM000126 | Putative peroxidase | ||
| Clone 617 | 242 | AF200528 | Ubiquitin carrier protein | ||
| Clone 670 | 286 | AP003252 | Cellulose synthase-4 | ||
| Clone 695 | 260 | BAG domain containing protein-like | |||
| Clone 163 | 449 | CM000126 AC131374 AC092263 CM000126 AAL34132 AC13174 ABR25322 AP003734 AY224431 AP005578 | Ubiquitin carrier protein | PI312777 (under salicylic acid treatment) | Fang et al, 2009 |
| Clone 171 | 388 | AP003263 | Putative receptor-like protein kinase | ||
| Clone 265 | 295 | CM000126 AF200528 AP003252 | Putative glutathione S-transferase | ||
| Clone 316 | 323 | Peptidyl-prolyl cis-trans isomerase | |||
| Clone 438 | 309 | Putative acetyltransferase | |||
| Clone 459 | 347 | Putative receptor-like protein kinase | |||
| Clone 507 | 303 | Phenylalanine ammonia-lyase | |||
| Clone 512 | 319 | Putative cinnamoyl-CoA reductase | |||
| Clone 557 | 345 | Serine/threonine protein kinase-like protein | |||
| Clone 587 | 200 | Putative endosperm specific protein SC3 | |||
| Clone 593 | 256 | Putative peroxidase | |||
| Clone 617 | 242 | Ubiquitin carrier protein | |||
| Clone 670 | 286 | Cellulose synthase-4 | |||
| Clone 695 | 260 | BAG domain containing protein-like |
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