Germplasm Resources, Genes and Perspective for Aromatic Rice

doi:10.1016/j.rsci.2023.03.011

摘要/Abstract

. [J]. Rice Science, 2023, 30(4): 294-305.

图/表 4

参考文献 91

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Country	Popular variety	Reference
Afghanistan	Bahra, Lawangi, Sela Takhar, Bala, Lawangin, Pashadi, Germa Bala, Sarda Bala, Luke Qasan, Torishi, Sela Doshi, Surkha-Bala, Pashadi Konar	Singh, 2000; Itani, 2002
Bangladesh	Kataribhog, Bau-pagal, Badshabhog, Kala Namak, Dadkhani, Kalazira, Banshful, Kataribagh, Tulshimala, BR36, BR6, BR26, Dolhabhog (BR5), Chinigura, BRRI dhan 70, Binadhan 13, BRRI dhan 38	Anik and Talukder, 2002; Vemireddy et al, 2021
Cambodia	Somali, Phka Rumduol, Phka Rumdeng, Phka Roment	Pachauri et al, 2010; Roy et al, 2020
China	Xianggeng 3, Xiangyou 63, Zhe 9248, Ganwanxian 22, SR5041, Dechangxiangmi, Beijingkoutou, Shuangzhuzhan, Xiangnuo 4, Tainung Sen 20, Yongshunxingdao, Qingbuxiangjingmi, Congjiangxixiangmi, Jingxixiangdao, Huanglongxiangmi, Jingcixiangdao, Jiangyongxiangdao, Qufuxiangmi	Yang et al, 2012; Verma et al, 2019
India	Basmati 370, Haryana Basmati 1, Kalanamak, Ranbir Basmati, Taraori Basmati, Basmati 386, Type 3, Pusa Basmati 1, Pusa Basmati 1121, Punjab Basmati 1, CSR30, Pusa 33, Amritsari Basmati	Nagaraju et al, 2002; Kiani et al, 2012; Singh et al, 2018; Verma et al, 2019
Indonesia	Rojo Lele, Bengwan Solo, Pare Kembang, Batang Gadis, Mentik Wangi, Sukanandi, Sinyanur, Pulu Mandoti, Pandanawangi, Gunung Perak	Kamath et al, 2008; Pachauri et al, 2010; Verma et al, 2019
Iran	Tarom Mahalli, Anbar-boo, Mirza, Fajr, Champa, Mir tarom, Hassani, Shiroudi, Nemat, Mehr, Mosa Tarom, Poya, Domsiah, Hasan, Sadri, Hashemi	Fukuoka et al, 2006; Kiani et al, 2012; Vemireddy et al, 2021
Iraq	Anbarboo	Pachauri et al, 2010
Japan	Miyakaori, Iwaga, Sari Queen, Kouikuka 37, Hieri, Jakou, Kabashiko, Oitakoutou	Hien et al, 2007; Ootsuka et al, 2014
Malaysia	MRQ74	Vemireddy et al, 2021
Myanmar	Boke Hmwe, Balugyun, Taungpyan Hmwe, Nyakywe, Nama Tha Lay, Pawsan Hmwe	Pachauri et al, 2010
Nepal	Basamati Pahade, Basmati Gola, Brahmaphool, Jetho Budho, Rato Basmati, Kalo, Basmati Uzarka, Basmati Dhan, Lamo, Basmati Red	Pachauri et al, 2010; Kishor et al, 2020
Pakistan	Basmati Pak, Basmati 385, Super Basmati, PK50005-3, Basmati 185, Basmati 50021-1, Basmati 377, Sathi Basmati	Khush, 2000; Kishor et al, 2020
Thailand	Buer Neo Moo, Hawm Klong Luang, Buer Ner Moo Pho Phi, Hawn Mali, RD15, Baow Hawm 62, Buer Ner Moo Phardo, Jao Mali, KDML105, Siamati, Hawm, Som Hung, Hawm Baow, RD6, Hawm Supanburi, Pla Sew, Nahng Nuan, Khao Dawk Mali, Thung Kula Rang-Hai Tahi Hom Mali	Itani et al, 2004; Pachauri et al, 2010; Verma et al, 2019; Roy et al, 2020
the Philippines	Azucena, Milagrosa, Binicol, Mangareez, Milfore 6(2)	Pachauri et al, 2010; Ootsuka et al, 2014
the USA	Texamati, Della, Carolina, A201, Dellamont, Kasmati, Jasmine 85, Sierra, Delrose, Delmont, Jazzman, JES	Khush, 2000; Verma et al, 2019
Vietnam	Di Huang, Tam Xuan Hai Hau, VD 20, Nang Thom, Nep Hoa Vang, Tam On, Nang Huong Ran, Nang Thom Muong, Tam Canh, Lam Thao, Hai Hau, Nep Bac, Tam Xoan, Can Duoc, Nep Rong, Lua Tam, Nam Dinh	Hien et al, 2007; Pachauri et al, 2010; Verma et al, 2019

Country	Popular variety	Reference
Afghanistan	Bahra, Lawangi, Sela Takhar, Bala, Lawangin, Pashadi, Germa Bala, Sarda Bala, Luke Qasan, Torishi, Sela Doshi, Surkha-Bala, Pashadi Konar	Singh, 2000; Itani, 2002
Bangladesh	Kataribhog, Bau-pagal, Badshabhog, Kala Namak, Dadkhani, Kalazira, Banshful, Kataribagh, Tulshimala, BR36, BR6, BR26, Dolhabhog (BR5), Chinigura, BRRI dhan 70, Binadhan 13, BRRI dhan 38	Anik and Talukder, 2002; Vemireddy et al, 2021
Cambodia	Somali, Phka Rumduol, Phka Rumdeng, Phka Roment	Pachauri et al, 2010; Roy et al, 2020
China	Xianggeng 3, Xiangyou 63, Zhe 9248, Ganwanxian 22, SR5041, Dechangxiangmi, Beijingkoutou, Shuangzhuzhan, Xiangnuo 4, Tainung Sen 20, Yongshunxingdao, Qingbuxiangjingmi, Congjiangxixiangmi, Jingxixiangdao, Huanglongxiangmi, Jingcixiangdao, Jiangyongxiangdao, Qufuxiangmi	Yang et al, 2012; Verma et al, 2019
India	Basmati 370, Haryana Basmati 1, Kalanamak, Ranbir Basmati, Taraori Basmati, Basmati 386, Type 3, Pusa Basmati 1, Pusa Basmati 1121, Punjab Basmati 1, CSR30, Pusa 33, Amritsari Basmati	Nagaraju et al, 2002; Kiani et al, 2012; Singh et al, 2018; Verma et al, 2019
Indonesia	Rojo Lele, Bengwan Solo, Pare Kembang, Batang Gadis, Mentik Wangi, Sukanandi, Sinyanur, Pulu Mandoti, Pandanawangi, Gunung Perak	Kamath et al, 2008; Pachauri et al, 2010; Verma et al, 2019
Iran	Tarom Mahalli, Anbar-boo, Mirza, Fajr, Champa, Mir tarom, Hassani, Shiroudi, Nemat, Mehr, Mosa Tarom, Poya, Domsiah, Hasan, Sadri, Hashemi	Fukuoka et al, 2006; Kiani et al, 2012; Vemireddy et al, 2021
Iraq	Anbarboo	Pachauri et al, 2010
Japan	Miyakaori, Iwaga, Sari Queen, Kouikuka 37, Hieri, Jakou, Kabashiko, Oitakoutou	Hien et al, 2007; Ootsuka et al, 2014
Malaysia	MRQ74	Vemireddy et al, 2021
Myanmar	Boke Hmwe, Balugyun, Taungpyan Hmwe, Nyakywe, Nama Tha Lay, Pawsan Hmwe	Pachauri et al, 2010
Nepal	Basamati Pahade, Basmati Gola, Brahmaphool, Jetho Budho, Rato Basmati, Kalo, Basmati Uzarka, Basmati Dhan, Lamo, Basmati Red	Pachauri et al, 2010; Kishor et al, 2020
Pakistan	Basmati Pak, Basmati 385, Super Basmati, PK50005-3, Basmati 185, Basmati 50021-1, Basmati 377, Sathi Basmati	Khush, 2000; Kishor et al, 2020
Thailand	Buer Neo Moo, Hawm Klong Luang, Buer Ner Moo Pho Phi, Hawn Mali, RD15, Baow Hawm 62, Buer Ner Moo Phardo, Jao Mali, KDML105, Siamati, Hawm, Som Hung, Hawm Baow, RD6, Hawm Supanburi, Pla Sew, Nahng Nuan, Khao Dawk Mali, Thung Kula Rang-Hai Tahi Hom Mali	Itani et al, 2004; Pachauri et al, 2010; Verma et al, 2019; Roy et al, 2020
the Philippines	Azucena, Milagrosa, Binicol, Mangareez, Milfore 6(2)	Pachauri et al, 2010; Ootsuka et al, 2014
the USA	Texamati, Della, Carolina, A201, Dellamont, Kasmati, Jasmine 85, Sierra, Delrose, Delmont, Jazzman, JES	Khush, 2000; Verma et al, 2019
Vietnam	Di Huang, Tam Xuan Hai Hau, VD 20, Nang Thom, Nep Hoa Vang, Tam On, Nang Huong Ran, Nang Thom Muong, Tam Canh, Lam Thao, Hai Hau, Nep Bac, Tam Xoan, Can Duoc, Nep Rong, Lua Tam, Nam Dinh	Hien et al, 2007; Pachauri et al, 2010; Verma et al, 2019

Candidate gene	Chr	Response to stress	Tissue specificity	Protein interaction	Subcellular localization	Reference
OsBadh1	8	Submergence, anoxia, salinity	Flowers, roots before flowering	Glutamate synthase	Peroxisome, chloroplast, cytoplsam, nucleus	Amarawathi et al, 2008; Pachauri et al, 2014
OsBadh2	3, 4 and 8	Anoxia, salinity, submergence	Flower buds, flowers	Glutamate synthase	Chloroplast, peroxisome, cytoplasm, nucleus	IRGSP, 2005
OsP5CS1	5	Salinity, anoxia, osmoregulation	Milk grains, flower buds	Ferredoxin- dependent glutamate synthase	Chloroplast, endoplasmic reticulum, nucleus, cytoplasm, mitochondria, plasma membrane, extracellular, vacuole	Kaikavoosi et al, 2015
OsP5CS2	5	Osmoregulation, anoxia, salinity	Flower buds, flowers	Glutamate synthase	Chloroplast, extracellular, nucleus, vacuole	Kaikavoosi et al, 2015
OsGlyI	5	Salinity, anoxia	Flower buds, leaves before flowering		Chloroplast, cytoplasm	Talukdar et al, 2017
OsGlyII	3	Anoxia, salinity	Flowers, flower buds	Glyoxalase	Cytoplasm, chloroplast, nucleus, extracellular	Huang et al, 2008; Pachauri et al, 2014
OsGlyIII	3	Salinity, anoxia	Leaves and roots before flowering	Ferredoxin-nitrite reductase	Chloroplast, peroxisome, cytoplasm, Golgi apparatus	Huang et al, 2008; Pachauri et al, 2014

Candidate gene	Chr	Response to stress	Tissue specificity	Protein interaction	Subcellular localization	Reference
OsBadh1	8	Submergence, anoxia, salinity	Flowers, roots before flowering	Glutamate synthase	Peroxisome, chloroplast, cytoplsam, nucleus	Amarawathi et al, 2008; Pachauri et al, 2014
OsBadh2	3, 4 and 8	Anoxia, salinity, submergence	Flower buds, flowers	Glutamate synthase	Chloroplast, peroxisome, cytoplasm, nucleus	IRGSP, 2005
OsP5CS1	5	Salinity, anoxia, osmoregulation	Milk grains, flower buds	Ferredoxin- dependent glutamate synthase	Chloroplast, endoplasmic reticulum, nucleus, cytoplasm, mitochondria, plasma membrane, extracellular, vacuole	Kaikavoosi et al, 2015
OsP5CS2	5	Osmoregulation, anoxia, salinity	Flower buds, flowers	Glutamate synthase	Chloroplast, extracellular, nucleus, vacuole	Kaikavoosi et al, 2015
OsGlyI	5	Salinity, anoxia	Flower buds, leaves before flowering		Chloroplast, cytoplasm	Talukdar et al, 2017
OsGlyII	3	Anoxia, salinity	Flowers, flower buds	Glyoxalase	Cytoplasm, chloroplast, nucleus, extracellular	Huang et al, 2008; Pachauri et al, 2014
OsGlyIII	3	Salinity, anoxia	Leaves and roots before flowering	Ferredoxin-nitrite reductase	Chloroplast, peroxisome, cytoplasm, Golgi apparatus	Huang et al, 2008; Pachauri et al, 2014

Developed improved variety	Target trait	Parent	QTL/gene used	Reference
HM80	Submergence resistance	IR49830-7-1-2-2 and KDML105	Sub1	Siangliw et al, 2003
Pusa 1460	Bacterial blight tolerance	IRBB55 and Pusa Basmati 1	xa13 and Xa21	Gopalakrishnan et al, 2008
HM812	Bacterial blight tolerance	IR1188 and KDML105	Xa21, xa5, xa33(t), xa34(t) and qBB11	Korinsak et al, 2009
IC-R28, IC-R68, IC-R32 and IC-R42	Bacterial blight tolerance	IRBB60 and CSR30	Xa21, xa13 and xa5	Baliyan et al, 2018
Pusa Basmati 1	Salt tolerance	FL478 and Pusa Basmati 1	Saltol QTL	Singh V K et al, 2018
Pusa Basmati 1718	Bacterial blight tolerant	SPS97 and PB1121	xa13 and Xa21	Singh V P et al, 2018
HM84	Brown planthopper, blast resistant, and salinity and drought tolerance	Abhaya, Rathu Heenati and KDML105	Sub1A, Xa21, xa5, BphQ12, Bph32, Bph3 and BLQ1	Vanavichit et al, 2018
Two superior BC₂F₁ recombinants	Semi-dwarf and blast tolerance	Pusa Basmati 1637 and Ranbir Basmati	Pi9 and sd1	Samal et al, 2019
Improved Kalanamak lines	Semi-dwarf trait	CSR10 and Kalanamak	Sd1	Srivastava et al, 2019

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