
Evaluation of Inherited Resistance Genes of Bacterial Leaf Blight, Blast and Drought Tolerance in Improved Rice Lines
Received date: 2020-02-10
Accepted date: 2020-08-06
Online published: 2021-05-28
Improved rice lines were developed frome three parents with the resistance or tolerance to bacterial leaf blight, blast and drought stress, respectively, using single-, double- and three-way crosses. The improved lines were assessed for agro-morphological and yield traits under non-drought stress (NS) and reproductive-stage drought stress (RS) treatments. The mean comparison of traits measured between parent plants and progenies (improved lines) were similar, and there were significant and non-significant differences among the parents and improved lines (genotypes) under NS and RS. Smilarly, there was significant and non-significant differences in the interaction among both parent varieties and improved lines for NS and RS. Cluster and 3D-model of principal component analysis did not generate categorical clusters according to crossing methods, and there were no exclusive crossing method inclined variations under the treatments. The improved lines were high-yielding, disease resistant, and drought-tolerant compared with their parents. All the crossing methods were good for this crop improvement program without preference to any, despite the number of genes introgressed.
Key words: rice; bacteria leaf blight; blast; drought tolerance; resistance gene
Silas Akos Ibrahim, Y. Rafii Mohd, Razi Ismail Mohd, Izan Ramlee Shairul, Abd Aziz Shamsudin Noraziyah, Ramli Asfaliza, Chibuike Chukwu Samuel, Swaray Senesie, Jalloh Momodu . Evaluation of Inherited Resistance Genes of Bacterial Leaf Blight, Blast and Drought Tolerance in Improved Rice Lines[J]. Rice Science, 2021 , 28(3) : 279 -288 . DOI: 10.1016/j.rsci.2020.08.001
| [1] | Akos I S, Rafii M Y, Ismail M R, Ramlee S I, Shamsudin N A A, Ramli A B, Haliru B S, Muhammad I, Chukwu S C. 2019a. A review on gene pyramiding of agronomic, biotic and abiotic traits in rice variety development. Int J Appl Biol, 3(2): 65-96. |
| [2] | Akos I S, Rafii M Y, Ismail, M R, Ramlee S I, Shamsudin N A A, Ramli A B, Jalloh M, Jamilu H, Swaray S. 2019b. Genetic inheritance of multiple traits of blast, bacteria leaf blight resistant and drought tolerant rice lines. Int J Appl Biol, 3(2): 1-35. |
| [3] | Asghar A H, Rashid M, Ashraf M, Khan M H, Chaudhry Z. 2007. Improvement of basmati rice, against fungal infection through gene transfer technology. Pak J Bot, 39(4): 1277-1283. |
| [4] | Ashkani S, Rafii M Y, Sariah M, Abdullah S N A, Rusli I, Harun A R, Latif M A. 2011. Analysis of simple sequence repeat markers linked with blast disease resistance genes in a segregating population of rice ( Oryza sativa). Genet Mol Res, 10(3): 1345-1355. |
| [5] | Atlin G N, Lafitte H R, Tao D, Laza M, Amante M, Courtois B. 2006. Developing rice cultivars for high fertility upland systems in the Asian tropics. Field Crops Res, 97: 43-52. |
| [6] | Baker J T, Allen Jr L H. 1993. Contrasting crop species responses to CO2 and temperature: Rice, soybean and citrus. Vegetation, 104: 239-260. |
| [7] | Barnabas B, Jager K, Feher A. 2008. The effect of drought and heat stress on reproductive processes in cereals. Plant Cell Environ, 31: 11-38. |
| [8] | Chang S Q, Chang T G, Song Q F, Zhu X G, Deng Q Y. 2016. Photosynthetic and agronomic traits of an elite hybrid rice Y-Liang-You 900 with a record-high yield. Field Crops Res, 187: 49-57. |
| [9] | Cruz R T, O’Toole J C, Dingkuhn M, Yambao E B, Thangaraj M, de Datta S K. 1986. Shoot and root responses to water deficit in rainfed rice. Aust J Plant Physiol, 13: 567-575. |
| [10] | Davatgar N, Weishabouri M R, Paskhah A R, Soltani A. 2009. Physiological and morphological responses of rice ( Oryza sativa L.) to varying water stress management strategies. Int J Plant Prod, 3: 19-32. |
| [11] | Falconer D S. 1989. Introduction to Quantitative Genetics. New York, USA: Longman. |
| [12] | Fitzgerald M A, McCouch S R, Hall R D. 2008. Not just a grain of rice: The quest for quality. Trends Plant Sci, 14(3): 133-139. |
| [13] | Garrity D P, O’Toole J C. 1994. Screening rice for drought resistance at the reproductive phase. Field Crops Res, 39: 99-110. |
| [14] | Geleta L F, Labuschagne M T, Viljoen C D. 2005. Genetic variability in pepper ( Capsicum annuum L.) estimated by morphological data and amplified fragment length polymorphism markers. Biodivers Conser, 14(10): 2361-2375. |
| [15] | Guerra E P, Destro D, Miranda L A, Montalvan R. 1999. Parent selection for intercrossing in food types soybean through multivariate genetic divergence. Acta Sci Agron, 21(3): 429-437. |
| [16] | Han L Z, Qiao Y L, Zhang S Y, Cao G L, Ye C R, Xu F R, Dai L Y, Ye J D, Koh H J. 2006. QTL analysis of some agronomic traits in rice under different growing environments. Agric Sci China, 5(1): 15-22. |
| [17] | He Q, Li D B, Zhu Y S, Tan M P, Zhang D P, Lin X H. 2006. Fine mapping of Xa2, a bacterial blight resistance gene in rice. Mol Breeding, 17: 1-6. |
| [18] | International Rice Research Institute (IRRI). 2014. Standard Evaluation System ( SES) for Rice. Manila, the Philippines: International rice research institute. |
| [19] | Jia Y L, McAdams S A, Bryan G T, Hershay H P, Valent B. 2000. Direct interaction of resistance gene and avirulence gene products confers rice blast resistance. Embo J, 19: 4004-4014. |
| [20] | Juraimi A S, Najib M Y M, Begum M, Anuar A R, Azmi M, Puteh A. 2009. Critical period of weed competition in direct seeded rice under saturated and flooded conditions. Pertanika J Trop Agric Sci, 32(2): 305-316. |
| [21] | Khush G S. 2005. What will it take to feed 5.0 billion rice consumers in 2030. Plant Mol Biol, 59(1): 1-6. |
| [22] | Kumar A, Dasgupta P, Kumar R. 2014. Emerging opportunities and challenges in rice production. Pop Kheti, 2(2): 6-11. |
| [23] | Lafitte H R, Price A H, Courtois B. 2004. Yield response to water deficit in an upland rice mapping population: Associations among traits and genetic markers. Theor Appl Genet, 109: 1237-1246. |
| [24] | Latif M A, Badsha M A, Tajul M I, Kabir M S, Rafii M Y, Mia M A T. 2011. Identification of genotypes resistant to blast, bacterial leaf blight, sheath blight and tungro and efficacy of seed treating fungicides against blast disease of rice. Sci Res Essays, 6(13): 2804-2811. |
| [25] | Luo Y, Tang P S, Febellar N G, TeBeest D O. 1998. Risk analysis of yield losses caused by rice leaf blast associated with temperature changes above and below for five Asian countries. Agric Ecosyst Environ, 68(3): 197-205. |
| [26] | Mashitah A B. 2018. Devlopment of weed competitive rice variety under water deficit conditions through marker assisted backcross breeding. [PhD Thesis]. Malaysia: Universiti Putra Malaysia. |
| [27] | Mazid M S, Rafii M Y, Hanafi M M, Rahim H A, Shabanimofrad M, Latif M A. 2013. Agro-morphological characterization and assessment of variability, heritability, genetic advance and divergence in bacterial blight resistant rice genotypes. S Afr J Bot, 86: 15-22. |
| [28] | Meena M L, Kumar N, Meena J K, Rai T. 2016. Genetic variability, heritability and genetic advances in chilli, Capsicum annuum. Biosci Biotechnol Res Commun, 9: 262-266. |
| [29] | Miah G, Rafii M Y, Ismail M R, Puteh A B, Rahim H A, Latif M A. 2015. Recurrent parent genome recovery analysis in a marker- assisted backcrossing program of rice (Oryza sativa L.). C R Biol, 338(2): 83-94. |
| [30] | Miah G, Rafii M Y, Ismail M R, Puteh A B, Rahim H A, Latiff M A. 2016. Marker-assisted introgression of broad-spectrum blast resistance genes into the cultivated MR219 rice variety. J Sci Food Agr, 97(9): 2810-2818. |
| [31] | Miura K, Ashikari M, Matsuoka M. 2011. The role of QTLs in the breeding of high-yielding rice. Trends Plant Sci, 16: 319-326. |
| [32] | Natraj Kumar P, Sujatha K, Laha G S, Srinivasa Rao K, Mishra B, Viraktamath B C, Hari Y, Reddy C S, Balachandran S M, Ram T, Sheshu Madhav M, Shobha Rani N, Neeraja C N, Ashok Reddy G, Shaik H, Sundaram R M. 2012. Identification and fine- mapping of Xa33, a novel gene for resistance to Xanthomonas oryzae pv. oryzae. Phytopathology, 102(2): 222-228. |
| [33] | Oladosu Y, Rafii M Y, Abdullah N, Abdul Malek A, Rahim H A, Hussin G, Abdul Latif M, Kareem I. 2014. Genetic variability and selection criteria in rice mutant lines as revealed by quantitative traits. Sci World J, 2014: 190531. |
| [34] | Rajashekara H, Ellur R K, Khanna A, Nagarajan M, Krishnan S G, Singh A K, Sharma P, Sharma T R, Singh U D. 2014. Inheritance of blast resistance and its allelic relationship with five major R genes in a rice landrace ‘Vanasurya’. Ind Phytopathol, 67(4): 365-369. |
| [35] | Ratner B. 2009. The correlation coefficient: Its values range between +1/-1, or do they? J Target Meas Anal Market, 17(2): 139-142. |
| [36] | Ribot C, Hirsch J, Balzergue S, Tharreau D, Notteghem J L, Lebrun M H, Morel J B. 2008. Susceptibility of rice to the blast fungus, Magnaporthe grisea. J Plant Physiol, 165(1): 114-124. |
| [37] | Ridzuan R, Rafii M Y, Yusoff M M, Ismail S I, Miah G, Usman M G. 2019. Genetic diversity analysis of selected Capsicum annuum genotypes based on morphophysiological, yield characteristics and their biochemical properties. J Sci Food Agr, 99: 269-280. |
| [38] | Robinson H F, Comstock R E, Harvey P H. 1949. Genotypic and phenotypic correlation in corn and their implications in selection. Agron J, 43(6): 282-287. |
| [39] | Serraj R, Kumar A, McNally K L, Slamet-Loedin I, Bruskiewich R, Mauleon R, Cairns J, Hijmans R J. 2009. Improvement of drought resistance in rice. Adv Agron, 103: 41-98. |
| [40] | Shamsudin N A A, Swamy B P M, Ratnam W, Cruz M T S, Raman A, Kumar A. 2016. Marker assisted pyramiding of drought yield QTLs into a popular Malaysian rice cultivar, MR219. BMC Genet, 17: 30. |
| [41] | Sikuku P A, Netondo G W, Musyimi D M, Onyango J C. 2010. Effects of water deficit on days to maturity and yield of three NERICA rainfed rice varieties. ARPN J Agric Biol Sci, 5(3): 1-9. |
| [42] | Singh S, Amartalingam R, Wan Harun W S, Islam M T. 1996. Simulated impact of climate change on rice production in Peninsular Malaysia. UPM: Proceeding of National Conference on Climate Change: 41-49. |
| [43] | Sukhla B. 2012. What is the importance of water for plants? Retrieved from . Accessed February 26, 2015. |
| [44] | Sundaram R M, Chatterjee S, Olivia R, Laha G S, Cruz C V, Leach J E, Sonti R V. 2014. Update on bacteria blight of rice: Fourth international conference on bacterial blight. Rice, 7: 12. |
| [45] | Taglea A G, Fujitaa D, Ebrona L A, Telebanco-Yanoriaa M J, Sasakia K, Shimarua T, Fukuta Y, Kobayashi N. 2016. Characterization of QTL for unique agronomic traits of new-plant-type rice varieties using introgression lines of IR64. Crop J, 4: 12-20. |
| [46] | Tashiro T, Wardlaw I F. 1989. A comparison of the effect of high temperature on grain development in wheat and rice. Ann Bot, 64(1): 59-65. |
| [47] | Yatung T, Dubey R K, Singh V, Upadhyay G. 2014. Genetic diversity of chilli ( Capsicum annum L.) genotypes of India based on morpho-chemical traits. Aust J Crop Sci, 8(1): 97-102. |
| [48] | Zhai W X, Zhu L H. 1999. Rice bacterial blight resistance genes and their utilization in molecular breeding. Biotechnol Progr, 19(6): 9-15. |
| [49] | Zhang G, Angeles E R, Abenes M L P, Khush G S, Huang N. 1996. RAPD and RFLP mapping of the bacterial blight resistance gene xa13 in rice. Theor Appl Genet, 93: 65-70. |
| [50] | Zhang S Y, Tan G L, Ren G M, Li M R, Li Y Y, Lan P X, Gui F R, Wang H N, Zhu S S, Li F. 2015. Investigation of rice virus diseases and analysis of the molecular variation of RSV isolates in the main rice-growing areas of Yunnan Province from 2013 to 2014. Chin J Rice Sci, 29(5): 535-545. (in Chinese with English abstract) |
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