Rice Science ›› 2016, Vol. 23 ›› Issue (6): 306-316.DOI: 10.1016/j.rsci.2016.04.005
• Orginal Article • Previous Articles Next Articles
Arunakumari K.1, V. Durgarani C.1, Satturu V.1, R. Sarikonda K.2, D. R. Chittoor P.3, Vutukuri B.2, S. Laha G.4, P. K. Nelli A.1, Gattu S.1, Jamal M.1, Prasadbabu A.5, Hajira S.4, M. Sundaram R.4
Received:
2015-12-01
Accepted:
2016-04-12
Online:
2016-12-12
Published:
2016-08-10
Arunakumari K., V. Durgarani C., Satturu V., R. Sarikonda K., D. R. Chittoor P., Vutukuri B., S. Laha G., P. K. Nelli A., Gattu S., Jamal M., Prasadbabu A., Hajira S., M. Sundaram R.. Marker-Assisted Pyramiding of Genes Conferring Resistance Against Bacterial Blight and Blast Diseases into Indian Rice Variety MTU1010[J]. Rice Science, 2016, 23(6): 306-316.
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Cross combination | Particular of cross combination | No. of plants screened | No. of plants confirmed | Gene combination in the confirmed plants |
MTU1010 × ISM (C1) | C1-F1 | 125 | 101 | Xa13xa13Xa21xa21 |
MTU1010 × C1-F1 | C1-BC1F1 | 293 | 8 | Xa13xa13Xa21xa21 |
MTU1010 × C1-BC1F1 | C1-BC2F1 | 534 | 11 | Xa13xa13Xa21xa21 |
MTU1010 × NLR145 (C2) | C2-F1 | 110 | 74 | Pi54pi54 |
MTU1010 × C2-F1 | C2-BC1F1 | 80 | 35 | Pi54pi54 |
MTU1010 × C2-BC1F1 | C2-BC2F1 | 268 | 17 | Pi54pi54 |
C1-BC2F1 × C2-BC2F1 | ICF1 | 360 | 4 | Xa13xa13Xa21xa21Pi54pi54 |
Selfed progeny of selected ICF1 plant | ICF2 | 880 | 7 | xa13xa13Xa21Xa21Pi54Pi54 |
Selfed progeny of ICF2 | ICF3 | - | 7 | xa13xa13Xa21Xa21Pi54Pi54 |
Table 1 Details of number of plants generated and confirmed to be resistance gene positive through marker analysis in each generation
Cross combination | Particular of cross combination | No. of plants screened | No. of plants confirmed | Gene combination in the confirmed plants |
MTU1010 × ISM (C1) | C1-F1 | 125 | 101 | Xa13xa13Xa21xa21 |
MTU1010 × C1-F1 | C1-BC1F1 | 293 | 8 | Xa13xa13Xa21xa21 |
MTU1010 × C1-BC1F1 | C1-BC2F1 | 534 | 11 | Xa13xa13Xa21xa21 |
MTU1010 × NLR145 (C2) | C2-F1 | 110 | 74 | Pi54pi54 |
MTU1010 × C2-F1 | C2-BC1F1 | 80 | 35 | Pi54pi54 |
MTU1010 × C2-BC1F1 | C2-BC2F1 | 268 | 17 | Pi54pi54 |
C1-BC2F1 × C2-BC2F1 | ICF1 | 360 | 4 | Xa13xa13Xa21xa21Pi54pi54 |
Selfed progeny of selected ICF1 plant | ICF2 | 880 | 7 | xa13xa13Xa21Xa21Pi54Pi54 |
Selfed progeny of ICF2 | ICF3 | - | 7 | xa13xa13Xa21Xa21Pi54Pi54 |
Fig. 1. Foreground selection for xa13 (A), Xa21 (B) and Pi54 (C) among ICF2 plants. R, Recurrent parent (MTU1010); D, Donor parent (ISM); M, 50 bp ladder molecular weight marker; Lanes 9-104 represent ICF2 plants. Arrow indicates a triple gene homozygous plant (ICF2-16-59).
Fig. 2. Screening of selected improved lines of MTU1010 against bacterial blight (A) and blast (B) diseases under controlled conditions. A, With respect to screening for bacterial blight resistance, the recurrent parent MTU1010 was highly susceptible, while the donor parent and the selected gene pyramided lines at ICF2 generation (1, ICF2-16-59; 2, ICF2-16-231; 3, ICF2-16-235; 4, ICF2-16-282; 5, ICF2-16-521; 6, ICF2-16-786; 7, ICF2-16-837) were highly resistant to the disease. B, When the selected ICF3 plants were screened for blast resistance through uniform blast nursery method, the susceptible check NLR34242 and recurrent parent MTU1010 were highly susceptible to blast disease, while the resistant donor NLR145 along with gene pyramided line ICF3-16-59 showed high level of resistance.
Plant identity | Allelic status of xa13, Xa21 and Pi54 | Disease scoring scale for BB in ICF2 | Disease scoring scale for rice blast in ICF3 | Background genome recovery (%) |
MTU1010 | Xa13Xa13xa21xa21pi54pi54 | 9 | 7 | - |
Improved Samba Mahsuri | xa13xa13Xa21Xa21 | 1 | - | - |
NLR145 | Pi54Pi54 | - | 3 | - |
ICF2:3-16-59 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 1 | 92 |
ICF2:3-16-231 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 85 |
ICF2:3-16-235 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 82 |
ICF2:3-16-282 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 83 |
ICF2:3-16-521 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 1 | 82 |
ICF2:3-16-786 | xa13xa13Xa21Xa21Pi54Pi54 | 3 | 2 | 83 |
ICF2:3-16-837 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 88 |
Table 2 Screening of three-gene positive ICF2 and ICF3 plants for resistance against bacterial blight (BB) disease and blast disease
Plant identity | Allelic status of xa13, Xa21 and Pi54 | Disease scoring scale for BB in ICF2 | Disease scoring scale for rice blast in ICF3 | Background genome recovery (%) |
MTU1010 | Xa13Xa13xa21xa21pi54pi54 | 9 | 7 | - |
Improved Samba Mahsuri | xa13xa13Xa21Xa21 | 1 | - | - |
NLR145 | Pi54Pi54 | - | 3 | - |
ICF2:3-16-59 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 1 | 92 |
ICF2:3-16-231 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 85 |
ICF2:3-16-235 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 82 |
ICF2:3-16-282 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 83 |
ICF2:3-16-521 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 1 | 82 |
ICF2:3-16-786 | xa13xa13Xa21Xa21Pi54Pi54 | 3 | 2 | 83 |
ICF2:3-16-837 | xa13xa13Xa21Xa21Pi54Pi54 | 1 | 2 | 88 |
Line | Days to heading (d) | Plant height (cm) | No. of productive panicles per plant | Panicle length (cm) | No. of filled grains per panicle | Grain yield per plant (g) | 1000-grain weight (g) | Grain type |
ICF3-16-59 | 87.3 | 106.0 | 15.7 | 31.3* | 118.3 | 24.0 | 16.3 | LS |
ICF3-16-231 | 83.6 | 104.0 | 17.0 | 30.3* | 111.7 | 24.7 | 16.5 | LS |
ICF3-16-235 | 86.0 | 105.7 | 18.7 | 29.0* | 130.0* | 27.0* | 17.1 | LS |
ICF3-16-282 | 85.3 | 107.3 | 17.7 | 28.7 | 114.7 | 24.3 | 16.5 | LS |
ICF3-16-521 | 85.7 | 106.3 | 14.7 | 27.7 | 110.3 | 24.0 | 16.4 | LS |
ICF3-16-786 | 87.7 | 107.0 | 13.3 | 28.0 | 101.7 | 23.3 | 16.8 | LS |
ICF3-16-837 | 88.0 | 103.7 | 16.7 | 26.7 | 108.0 | 23.7 | 16.7 | LS |
MTU1010 | 86.7 | 107.3 | 16.7 | 26.0 | 117.7 | 23.7 | 16.4 | LS |
SD | 1.4 | 1.4 | 1.7 | 1.6 | 8.4 | 1.1 | 0.3 | |
CV (%) | 1.7 | 1.3 | 10.4 | 6.2 | 7.4 | 4.4 | 1.6 | |
CD (5%) | 1.4 | 2.7 | 2.0 | 2.0 | 2.6 | 1.0 | 0.1 | |
SD, Standard deviation; CV, Coefficient of variation; CD, Critical difference; LS, Long slender grain type. *, Values significantly different from MTU1010 at the 0.05 level. |
Table 3 Mean values of agro-morphological characters of three resistant gene pyramided ICF3 lines
Line | Days to heading (d) | Plant height (cm) | No. of productive panicles per plant | Panicle length (cm) | No. of filled grains per panicle | Grain yield per plant (g) | 1000-grain weight (g) | Grain type |
ICF3-16-59 | 87.3 | 106.0 | 15.7 | 31.3* | 118.3 | 24.0 | 16.3 | LS |
ICF3-16-231 | 83.6 | 104.0 | 17.0 | 30.3* | 111.7 | 24.7 | 16.5 | LS |
ICF3-16-235 | 86.0 | 105.7 | 18.7 | 29.0* | 130.0* | 27.0* | 17.1 | LS |
ICF3-16-282 | 85.3 | 107.3 | 17.7 | 28.7 | 114.7 | 24.3 | 16.5 | LS |
ICF3-16-521 | 85.7 | 106.3 | 14.7 | 27.7 | 110.3 | 24.0 | 16.4 | LS |
ICF3-16-786 | 87.7 | 107.0 | 13.3 | 28.0 | 101.7 | 23.3 | 16.8 | LS |
ICF3-16-837 | 88.0 | 103.7 | 16.7 | 26.7 | 108.0 | 23.7 | 16.7 | LS |
MTU1010 | 86.7 | 107.3 | 16.7 | 26.0 | 117.7 | 23.7 | 16.4 | LS |
SD | 1.4 | 1.4 | 1.7 | 1.6 | 8.4 | 1.1 | 0.3 | |
CV (%) | 1.7 | 1.3 | 10.4 | 6.2 | 7.4 | 4.4 | 1.6 | |
CD (5%) | 1.4 | 2.7 | 2.0 | 2.0 | 2.6 | 1.0 | 0.1 | |
SD, Standard deviation; CV, Coefficient of variation; CD, Critical difference; LS, Long slender grain type. *, Values significantly different from MTU1010 at the 0.05 level. |
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